After the attack, the clone navy fleet was cripple due to the attack that the cons did, and J sent his fleet to help the clones, as well as Spydon Jack was talking to cross.

Jack: Let me guess, the president wants to know how the cons attacked us...

Cross: Yes, sir....

Jack: Any word on Joey Fleet?

Cross: Last, he reported he and his fleet are in the Pacific, also, Ghost is still at Cybertron ...

Jack: Good....

cross: there are more than the cons, and the mech have been increasing their attacks on the nest, and the autobots are now saying that this is a new threat...

jack: what's this new threat?

Cross: we don't know about  but Optimus is going to keep us informed on this new threat...

Jack: good... how dose the repairs coming along?

Cross: we only have three venators ready for combat but the rest of the venators are still heaviy damage including our fighters...

Jack: call back the cis we need them back to protect us for now....

Cross: you know thats going to be hard their are some that hate the clone army they rather let us deal with this then join in...

Jack: get the joey and the cis including the clone commanders and captain in the meeting room.. now!!

As Cross went to get the leaders of both republic and the cis were in in the room with the president Obama 

Obama: is it true that men are still trapped alive  inside the Resolute?

Sarah: we been hearing taps in side he hull we are trying to get to them but its hard due to the danger of the area..

Obama: we been trained to think we are invincible and now the republic ship have been destroyed by the enemy we thought they didn't have the firepower ... we are on the ropes that's why we need to strike back.

Joey: my fleet is already making plans to strike them..

Obama: I am talking about the heart of the cons like the way they hit us..

Spydon: Mr. President what happen at nest base shipyard caught us off guard and we ingored facts... we can't ingnore them now we can't risk lose more ships...

Obama: ghost?

ghost: the cis has the bombers that can fit in our carriers but we have to get them close and exposing our ships including joeys ships... if we do this this will leave this nation along the other bases exposed from any other attack from the cons or from mech.

Obama: dose anyone in this room think victor  is possible without taking risk...

Spydon:  i consider the risk but we can't....

Obama: when i heard your the stories about you and the republic the way you fight for people...

Spydon: what you are asking its impossible....

Obama: don't tell me that nothing is impossible ... just get the plan done

after the meeting jack went to see team prime to tell them what happen at nest base..

optimus: its good to see you jack we heard what had happen at nest base...

Jack: We lost a lot of good men in the attack... we are still trying to get some men out of the damaged venators....

Bulkhead: I'm sorry to hear about your loss kid... 

Jack: 2,335  troopers were killed in the attack...

Raf: you couldn't know the cons would do this...

Jack: you want to know the worst part of this Raf... me and the others are used to his and we knew the risk when we decided to help the autobots with their war... i came here because you found a new threat?

Optimus: we found that there is a new mech we don't have much intel on them at the moment...

Jack: i see keep me inform

back to joey and his fleet he was in the pacific with his large fleet onboard the Arizona 

Sam: admiral on deck!!

joey: as you were... sam what did you find?

Sam: on our radar we pick up a strange object that is 600 miles to the south.... we sent drones to see but they went off line when they get close to it..

Joey: get me the john Paul jones tell them that they will with two battleships to the location and tell them to inform me when they get there...

Sam: yes sir..

as the john Paul jones went with two battleship to the location as the time they got there the unknow object started to formed a shield to keep joey and the fleet out of the location that it was at.

( start at the 0:00 to the end replace two destroyers as battleships in cis colors and the unknown group is part of the deception's allies that team prime found out about) 

https://youtu.be/7FeH-PVcob4